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Structure of hexagonal turkey egg white lysozyme at 1.65 ångströms resolution

Analyse Structure of hexagonal turkey egg white lysozyme at 1.65 ångströms resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1TEW
Type
protein
Length
128 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Turkey egg white lysozyme
EC
3.2.1.17
UniProt
P00703
Ligands
SCN
Pockets
1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 9% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATurkey egg white lysozyme (EC 3.2.1.17)protein12843% helix, 9% strandP00703

Ligands and binding sites

  • SCN · Thiocyanate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1510.330.7813empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 1TEW · Structure of hexagonal turkey egg white lysozyme at 1.65 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
  • P00703 · AlphaFold monomer V2.0 prediction for lysozyme C (P00703) · a predicted model of the same protein · chain A against A, TM-score 0.99

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