Research workbench
Tandem DNA, NMR, minimized average structure
Analyse Tandem DNA, NMR, minimized average structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1TAN
- Type
- DNA
- Length
- 16 nucleotides
- Chains
- 3
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(P*TP*GP*GP*AP*GP*CP*TP*G)-3'); DNA (5'-D(P*CP*AP*GP*C)-3'); DNA…
Structure
solution nmr · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(P*TP*GP*GP*AP*GP*CP*TP*G)-3') | dna | 8 | — | — |
| B | DNA (5'-D(P*CP*AP*GP*C)-3') | dna | 4 | — | — |
| C | DNA (5'-D(P*TP*CP*CP*A)-3') | dna | 4 | — | — |
Interfaces
3 interfaces between chains.
- A–C · 208 Ų buried · 15 hydrogen bonds · nucleic-nucleic
- A–B · 199 Ų buried · 14 hydrogen bonds · nucleic-nucleic
- B–C · 107 Ų buried · 3 hydrogen bonds · nucleic-nucleic
Compared structures
- 1TAN · Tandem DNA, NMR, minimized average structure · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1TAN · PDBe 1TAN
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