Research workbench
Drosophila tbp associated factors DTAFII42/DTAFII62 heterotetramer
Analyse Drosophila tbp associated factors DTAFII42/DTAFII62 heterotetramer in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1TAF
- Type
- protein
- Length
- 138 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tfiid tbp associated factor 42; Tfiid tbp associated factor 62
- UniProt
- Q27272, P49847
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains · 69% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tfiid tbp associated factor 42 | protein | 68 | 72% helix, 3% strand | Q27272 |
| B | Tfiid tbp associated factor 62 | protein | 70 | 66% helix, 3% strand | P49847 |
Ligands and binding sites
- ZN · Zinc ion · metal · 7 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1737 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
- 1TAF · Drosophila tbp associated factors DTAFII42/DTAFII62 heterotetramer · the same entry in another collection · chain A against A, TM-score 1.00
- Q27272 · AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid subunit 9… · a predicted model of the same protein · chain A against A, TM-score 0.91
- P49847 · AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid subunit 6… · a predicted model of the same protein · chain B against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q27272
- Every structure of UniProt P49847
- Elsewhere: RCSB PDB 1TAF · PDBe 1TAF · UniProt Q27272 · UniProt P49847
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.