Research workbench
Crystal structure of the triticum aestivum xylanase inhibitor I
Analyse Crystal structure of the triticum aestivum xylanase inhibitor I in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1T6E
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Xylanase inhibitor
- EC
- 3.2.1.8
- UniProt
- Q8H0K8
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 14% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Xylanase inhibitor (EC 3.2.1.8) | protein | 362 | 14% helix, 37% strand | Q8H0K8 |
Ligands and binding sites
- GOL · Glycerol · additive · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.55 | 0.79 | 40 | empty |
| 2 | 63 | 0.28 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 1T6E · Crystal Structure of the Triticum aestivum xylanase inhibitor I · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8H0K8
- Elsewhere: RCSB PDB 1T6E · PDBe 1T6E · UniProt Q8H0K8
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