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Solution structure of the S. cerevisiae U6 intramolecular stem loop (isl) RNA at pH 5.7

Analyse Solution structure of the S. cerevisiae U6 intramolecular stem loop (isl) RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1SYZ
Type: RNA
Length: 24 nucleotides
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: U6 intramolecular stem-loop RNA
Pockets: 1 · best druggability 0.27

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	U6 intramolecular stem-loop RNA	rna	24	—	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.27	0.71	10	empty

Compared structures

1SYZ · Solution structure of the S. Cerevisiae U6 intramolecular stem loop (ISL) RNA at pH 5.7 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1SYZ · PDBe 1SYZ

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