Research workbench
S. cerevisiae SWI6 ankyrin-repeat fragment
Analyse S. cerevisiae SWI6 ankyrin-repeat fragment in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SW6
- Type
- protein
- Length
- 508 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Regulatory protein SWI6
- UniProt
- P09959
- Pockets
- 3 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 50% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Regulatory protein SWI6 | protein | 254 | 51% helix, 5% strand | P09959 |
| B | Regulatory protein SWI6 | protein | 254 | 50% helix, 5% strand | P09959 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 695 | 0.71 | 0.78 | 50 | empty |
| 2 | 123 | 0.50 | 0.80 | 27 | empty |
| 3 | 110 | 0.42 | 0.77 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 721 Ų buried · 10 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09959
- Elsewhere: RCSB PDB 1SW6 · PDBe 1SW6 · UniProt P09959
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