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Structure of DNA gyrase a C-terminal domain

Analyse Structure of DNA gyrase a C-terminal domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1SUU
Type: protein
Length: 293 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA gyrase subunit a
EC: 5.99.1.3
UniProt: O51396
Pockets: 2 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA gyrase subunit a (EC 5.99.1.3)	protein	293	8% helix, 45% strand	O51396

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	728	0.74	0.80	64	empty
2	51	0.29	0.75	12	empty

Compared structures

1SUU · Structure of DNA gyrase A C-terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
O51396 · AlphaFold monomer V2.0 prediction for DNA gyrase subunit a (O51396) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O51396
Elsewhere: RCSB PDB 1SUU · PDBe 1SUU · UniProt O51396

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