Research workbench
Structural genomics, 1.9A crystal structure of cobalamin biosynthesis protein (cbid) from archaeoglobus fulgidus
Analyse Structural genomics, 1.9A crystal structure of cobalamin biosynthesis protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SR8
- Type
- protein
- Length
- 282 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cobalamin biosynthesis protein (cbid)
- UniProt
- O29535
- Pockets
- 1 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cobalamin biosynthesis protein (cbid) | protein | 282 | 34% helix, 28% strand | O29535 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 440 | 0.65 | 0.78 | 41 | empty |
Compared structures
- 1SR8 · Structural Genomics, 1.9A crystal structure of cobalamin biosynthesis protein (cbiD) from… · the same entry in another collection · chain A against A, TM-score 1.00
- O29535 · AlphaFold monomer V2.0 prediction for cobalt-precorrin-5B C(1)-methyltransferase (O29535) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O29535
- Elsewhere: RCSB PDB 1SR8 · PDBe 1SR8 · UniProt O29535
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