Research workbench
Crystal structure of the putative phosphatase of escherichia COLI, northeast structural genomoics target ER58
Analyse Crystal structure of the putative phosphatase of escherichia COLI, northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SPV
- Type
- protein
- Length
- 172 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative POLYPROTEIN/PHOSPHATASE
- UniProt
- P0A8D6
- Pockets
- 1 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative POLYPROTEIN/PHOSPHATASE | protein | 172 | 44% helix, 17% strand | P0A8D6 |
Ligands and binding sites
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 173 | 0.56 | 0.81 | 30 | MES |
Modifications
Observed in the structure: 1 modified (engineered).
Compared structures
- 1SPV · Crystal Structure of the Putative Phosphatase of Escherichia coli, Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A8D6 · AlphaFold monomer V2.0 prediction for O-acetyl-ADP-ribose deacetylase (P0A8D6) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A8D6
- Elsewhere: RCSB PDB 1SPV · PDBe 1SPV · UniProt P0A8D6
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