Research workbench
Sialidase L from leech macrobdella decora
Analyse Sialidase L from leech macrobdella decora in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SLL
- Type
- protein
- Length
- 679 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sialidase L
- EC
- 3.2.1.18
- UniProt
- Q27701
- Pockets
- 6 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sialidase L (EC 3.2.1.18) | protein | 679 | 5% helix, 46% strand | Q27701 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.68 | 0.90 | 27 | empty |
| 2 | 279 | 0.61 | 0.79 | 37 | empty |
| 3 | 217 | 0.56 | 0.79 | 31 | empty |
| 4 | 211 | 0.48 | 0.75 | 32 | empty |
| 5 | 155 | 0.46 | 0.76 | 23 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q27701
- Elsewhere: RCSB PDB 1SLL · PDBe 1SLL · UniProt Q27701
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