Research workbench
Three-dimensional structure of bombyxin-II, an insulin-related brain- secretory peptide of the silkmoth bombyx mori: comparison with insulin and relaxin
Analyse Three-dimensional structure of bombyxin-II, an insulin-related brain- secretory… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BOM
- Type
- protein
- Length
- 48 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bombyxin-II,BOMBYXIN a-2; Bombyxin-II,BOMBYXIN a-6
- UniProt
- P15411, P26729
Structure
solution nmr · 2 distinct chains · 23% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bombyxin-II,BOMBYXIN a-2 | protein | 20 | 20% helix, 0% strand | P15411 |
| B | Bombyxin-II,BOMBYXIN a-6 | protein | 28 | 25% helix, 0% strand | P26729 |
Interfaces
1 interface between chains.
- A–B · 462 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 3 disulfide, 1 modified (disulfide, cyclization).
Compared structures
- 1BOM · Three-dimensional structure of bombyxin-II, an insulin-related brain-secretory peptide of… · the same entry in another collection · chain A against A, TM-score 1.00
- P26729 · AlphaFold monomer V2.0 prediction for bombyxin a-6 (P26729) · a predicted model of the same protein · chain B against A, TM-score 0.47
- P15411 · AlphaFold monomer V2.0 prediction for bombyxin a-2 (P15411) · a predicted model of the same protein · chain A against A, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15411
- Every structure of UniProt P26729
- Elsewhere: RCSB PDB 1BOM · PDBe 1BOM · UniProt P15411 · UniProt P26729
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.