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Alternative native flap conformation revealed by 2.3 ångströms resolution structure of SIV proteinase
Analyse Alternative native flap conformation revealed by 2.3 ångströms resolution… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SIP
- Type
- protein
- Length
- 99 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Unliganded SIV protease
- EC
- 3.4.23.-
- UniProt
- Q87706
- Pockets
- 2 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Unliganded SIV protease (EC 3.4.23.-) | protein | 99 | 6% helix, 44% strand | Q87706 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.39 | 0.75 | 16 | empty |
| 2 | 52 | 0.27 | 0.74 | 18 | empty |
Compared structures
- 1SIP · Alternative native flap conformation revealed by 2.3 ångströms resolution structure of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87706
- Elsewhere: RCSB PDB 1SIP · PDBe 1SIP · UniProt Q87706
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