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Crystal structure of norwalk virus polymerase (metal-free, centered orthorhombic)
Analyse Crystal structure of norwalk virus polymerase (metal-free, centered… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SH2
- Type
- protein
- Length
- 502 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA polymerase
- EC
- 2.7.7.48
- UniProt
- Q70ET3
- Pockets
- 3 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase (EC 2.7.7.48) | protein | 502 | 42% helix, 17% strand | Q70ET3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 752 | 0.72 | 0.78 | 69 | empty |
| 2 | 315 | 0.60 | 0.78 | 48 | empty |
| 3 | 63 | 0.30 | 0.75 | 18 | empty |
Compared structures
- 1SH2 · Crystal Structure of Norwalk Virus Polymerase (Metal-free, Centered Orthorhombic) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q70ET3
- Elsewhere: RCSB PDB 1SH2 · PDBe 1SH2 · UniProt Q70ET3
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