Research workbench
Structure of allantoicase
Analyse Structure of allantoicase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SG3
- Type
- protein
- Length
- 634 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Allantoicase
- EC
- 3.5.3.4
- UniProt
- P25335
- Pockets
- 6 · best druggability 0.76
Structure
x-ray diffraction · 2 distinct chains · 10% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Allantoicase (EC 3.5.3.4) | protein | 317 | 9% helix, 41% strand | P25335 |
| B | Allantoicase (EC 3.5.3.4) | protein | 317 | 10% helix, 40% strand | P25335 |
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 968 | 0.76 | 0.79 | 87 | empty |
| 2 | 293 | 0.67 | 0.82 | 41 | empty |
| 3 | 293 | 0.67 | 0.82 | 36 | empty |
| 4 | 200 | 0.55 | 0.79 | 32 | empty |
| 5 | 198 | 0.55 | 0.79 | 29 | empty |
Interfaces
1 interface between chains.
- A–B · 1422 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25335
- Elsewhere: RCSB PDB 1SG3 · PDBe 1SG3 · UniProt P25335
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