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The structure of active serpin K from manduca sexta and a model for serpin-protease complex formation
Analyse The structure of active serpin K from manduca sexta and a model for… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SEK
- Type
- protein
- Length
- 376 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Serpin K
- UniProt
- P14754
- Pockets
- 2 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serpin K | protein | 376 | 33% helix, 33% strand | P14754 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 288 | 0.65 | 0.82 | 35 | empty |
| 2 | 136 | 0.59 | 0.84 | 31 | empty |
Compared structures
- 1SEK · The structure of active serpin K from manduca sexta and a model for serpin-protease… · the same entry in another collection · chain A against A, TM-score 1.00
- P14754 · AlphaFold monomer V2.0 prediction for alaserpin (P14754) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14754
- Elsewhere: RCSB PDB 1SEK · PDBe 1SEK · UniProt P14754
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