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C-terminal region of fen-1 bound to a. fulgidus PCNA

Analyse C-terminal region of fen-1 bound to a. fulgidus PCNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1RXM
Type: protein
Length: 257 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA polymerase sliding clamp; Consensus fen-1 peptide
UniProt: O29912

Structure

x-ray diffraction · 2 distinct chains · 19% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA polymerase sliding clamp	protein	245	19% helix, 47% strand	O29912
B	Consensus fen-1 peptide	protein	12	25% helix, 25% strand	—

Interfaces

1 interface between chains.

A–B · 667 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

1RXM · C-terminal region of FEN-1 bound to A. fulgidus PCNA · the same entry in another collection · chain A against A, TM-score 1.00
O29912 · AlphaFold monomer V2.0 prediction for DNA polymerase sliding clamp (O29912) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O29912
Elsewhere: RCSB PDB 1RXM · PDBe 1RXM · UniProt O29912

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