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RNA duplex containing a purine-rich strand, NMR, 10 structures

Analyse RNA duplex containing a purine-rich strand, NMR, 10 structures in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1RRR
Type
RNA
Length
20 nucleotides
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'); RNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3')

Structure

solution nmr · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
ARNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3')rna10——
BRNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3')rna10——

Interfaces

1 interface between chains.

  • A–B · 453 Ų buried · 50 hydrogen bonds · nucleic-nucleic

Compared structures

  • 1RRR · RNA duplex containing a purine-rich strand, NMR, 10 structures · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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