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NMR structure of dimeric N-terminal domain of ribosomal protein L7 from E.COLI

Analyse NMR structure of dimeric N-terminal domain of ribosomal protein L7 from E.COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1RQT
Type: protein
Length: 74 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 50S ribosomal protein L7/L12
UniProt: P0A7K2
Pockets: 1 · best druggability 0.64

Structure

solution nmr · 1 distinct chain · 59% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	50S ribosomal protein L7/L12	protein	37	59% helix, 0% strand	P0A7K2

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	395	0.64	0.77	38	empty

Interfaces

1 interface between chains.

A–B · 707 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

1RQT · NMR structure of dimeric N-terminal domain of ribosomal protein L7 from E.coli · the same entry in another collection · chain A against A, TM-score 1.00
P0A7K2 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L7/L12 (P0A7K2) · a predicted model of the same protein · chain A against A, TM-score 0.75

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A7K2
Elsewhere: RCSB PDB 1RQT · PDBe 1RQT · UniProt P0A7K2

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