Research workbench

Structure of the calcium free form of the C-type lectin-like domain of tetranectin

Analyse Structure of the calcium free form of the C-type lectin-like domain of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1RJH
Type: protein
Length: 118 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tetranectin
UniProt: P05452
Pockets: 1 · best druggability 0.47

Structure

solution nmr · 1 distinct chain · 19% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tetranectin	protein	118	19% helix, 19% strand	P05452

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	174	0.47	0.76	27	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1RJH · Structure of the Calcium Free Form of the C-type Lectin-like Domain of Tetranectin · the same entry in another collection · chain A against A, TM-score 1.00
P05452 · AlphaFold monomer V2.0 prediction for tetranectin (P05452) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P05452
Elsewhere: RCSB PDB 1RJH · PDBe 1RJH · UniProt P05452

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.