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Ribonuclease MC1 from the seeds of bitter gourd

Analyse Ribonuclease MC1 from the seeds of bitter gourd in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1BK7
Type: protein
Length: 190 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (ribonuclease MC1)
EC: 3.1.27.1
UniProt: P23540
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (ribonuclease MC1) (EC 3.1.27.1)	protein	190	38% helix, 22% strand	P23540

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.33	0.75	17	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1BK7 · Ribonuclease MC1 from the seeds of bitter gourd · the same entry in another collection · chain A against A, TM-score 1.00
P23540 · AlphaFold monomer V2.0 prediction for ribonuclease mc (P23540) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P23540
Elsewhere: RCSB PDB 1BK7 · PDBe 1BK7 · UniProt P23540

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