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The crystal structure of the kunitz (sti) type inhibitor from seeds of delonix regia
Analyse The crystal structure of the kunitz (sti) type inhibitor from seeds of delonix… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1R8N
- Type
- protein
- Length
- 185 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Kunitz trypsin inhibitor
- UniProt
- P83667
- Pockets
- 2 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Kunitz trypsin inhibitor | protein | 185 | 2% helix, 37% strand | P83667 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.46 | 0.84 | 17 | empty |
| 2 | 61 | 0.35 | 0.78 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1R8N · The Crystal Structure of the Kunitz (STI) Type Inhibitor from Seeds of Delonix regia · the same entry in another collection · chain A against A, TM-score 1.00
- P83667 · AlphaFold monomer V2.0 prediction for kunitz-type serine protease inhibitor drti (P83667) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P83667
- Elsewhere: RCSB PDB 1R8N · PDBe 1R8N · UniProt P83667
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