Research workbench
1H NMR of (12-53) NCP7/D(ACGCC) complex, 10 structures
Analyse 1H NMR of (12-53) NCP7/D(ACGCC) complex, 10 structures in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BJ6
- Type
- protein + DNA
- Length
- 47 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*AP*CP*GP*CP*C)-3'); Nucleocapsid protein 7
- UniProt
- Q74084
- Ligands
- ZN
Structure
solution nmr · 2 distinct chains · 0% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | DNA (5'-D(*AP*CP*GP*CP*C)-3') | dna | 5 | — | — |
| A | Nucleocapsid protein 7 | protein | 42 | 0% helix, 5% strand | Q74084 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- D–A · 665 Ų buried · 22 hydrogen bonds · protein-nucleic
Compared structures
- 1BJ6 · 1H NMR of (12-53) NCP7/D(ACGCC) complex, 10 structures · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q74084
- Elsewhere: RCSB PDB 1BJ6 · PDBe 1BJ6 · UniProt Q74084
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