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Polygalacturonase from erwinia carotovora ssp. carotovora

Analyse Polygalacturonase from erwinia carotovora ssp. carotovora in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1BHE
Type: protein
Length: 376 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polygalacturonase
EC: 3.2.1.15
UniProt: P26509
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polygalacturonase (EC 3.2.1.15)	protein	376	5% helix, 48% strand	P26509

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	350	0.54	0.74	38	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1BHE · Polygalacturonase from erwinia carotovora ssp. carotovora · the same entry in another collection · chain A against A, TM-score 1.00
P26509 · AlphaFold monomer V2.0 prediction for endo-polygalacturonase (P26509) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26509
Elsewhere: RCSB PDB 1BHE · PDBe 1BHE · UniProt P26509

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