Research workbench
Chloramphenicol phosphotransferase in complex with chloramphenicol from streptomyces venezuelae
Analyse Chloramphenicol phosphotransferase in complex with chloramphenicol from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1QHS
- Type
- protein
- Length
- 178 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (chloramphenicol phosphotransferase)
- EC
- 2.7.1.-
- UniProt
- Q56148
- Ligands
- CLM, SO4
- Pockets
- 1 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (chloramphenicol phosphotransferase) (EC 2.7.1.-) | protein | 178 | 44% helix, 19% strand | Q56148 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 325 | 0.66 | 0.81 | 54 | SO4, CLM |
Compared structures
- 1QHS · Chloramphenicol phosphotransferase in complex with chloramphenicol from streptomyces… · the same entry in another collection · chain A against A, TM-score 1.00
- Q56148 · AlphaFold monomer V2.0 prediction for chloramphenicol 3-O phosphotransferase (Q56148) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56148
- Elsewhere: RCSB PDB 1QHS · PDBe 1QHS · UniProt Q56148
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