Research workbench
Refinement of rubredoxin from desulfovibrio vulgaris at 1.0 ångströms with and without restraints
Analyse Refinement of rubredoxin from desulfovibrio vulgaris at 1.0 ångströms with and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 8RXN
- Type
- protein
- Length
- 52 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rubredoxin
- UniProt
- P00269
- Ligands
- FE, SO4
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rubredoxin | protein | 52 | 17% helix, 23% strand | P00269 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8RXN · Refinement of rubredoxin from desulfovibrio vulgaris at 1.0 ångströms with and without… · the same entry in another collection · chain A against A, TM-score 1.00
- P00269 · AlphaFold monomer V2.0 prediction for rubredoxin (P00269) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00269
- Elsewhere: RCSB PDB 8RXN · PDBe 8RXN · UniProt P00269
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