Research workbench

At from first module of the pikromycin synthase

Analyse At from first module of the pikromycin synthase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 8CZC
Type: protein
Length: 315 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NARBONOLIDE/10-deoxymethynolide synthase PIKA1, modules 1 and 2
EC: 2.3.1.239, 2.3.1.240
UniProt: Q9ZGI5
Pockets: 1 · best druggability 0.64

Structure

electron microscopy · 1 distinct chain · 45% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	NARBONOLIDE/10-deoxymethynolide synthase PIKA1, modules 1 and 2 (EC 2.3.1.239, 2.3.1.240)	protein	315	45% helix, 16% strand	Q9ZGI5

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	301	0.64	0.80	44	empty

Compared structures

8CZC · AT from first module of the pikromycin synthase · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9ZGI5
Elsewhere: RCSB PDB 8CZC · PDBe 8CZC · UniProt Q9ZGI5

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.