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Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 a

Analyse Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 a in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7ZVM
Type: protein
Length: 104 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mannose-6-phosphate isomerase
UniProt: F0LL70
Ligands: MG
Pockets: 1 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 59% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mannose-6-phosphate isomerase	protein	104	0% helix, 59% strand	F0LL70

Ligands and binding sites

MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	167	0.69	0.88	25	empty

Compared structures

7ZVM · Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt F0LL70
Elsewhere: RCSB PDB 7ZVM · PDBe 7ZVM · UniProt F0LL70

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