Research workbench
Omi-38 Fab in complex with SARS-cov-2 beta spike
Analyse Omi-38 Fab in complex with SARS-cov-2 beta spike in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7ZRC
- Type
- protein
- Length
- 3,852 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2, P10104
- Ligands
- NAG
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 1059 | — | P0DTC2, P10104 |
| C | — | protein | 1059 | — | P0DTC2, P10104 |
| A | — | protein | 1056 | — | P0DTC2, P10104 |
| H, F, J | — | protein | 118 | — | — |
| L, G, K | — | protein | 108 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 52 copies · chains B, C, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ZRC · Omi-38 Fab in complex with SARS-cov-2 beta spike · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Every structure of UniProt P10104
- Elsewhere: RCSB PDB 7ZRC · PDBe 7ZRC · UniProt P0DTC2 · UniProt P10104
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