Research workbench
Crystal structure of CRY78AA
Analyse Crystal structure of CRY78AA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7Y79
- Type
- protein
- Length
- 383 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Toxin
- UniProt
- A0A3S6Q0Y2
- Pockets
- 3 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Toxin | protein | 188 | 19% helix, 45% strand | A0A3S6Q0Y2 |
| B | Toxin | protein | 195 | 18% helix, 44% strand | A0A3S6Q0Y2 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 491 | 0.61 | 0.75 | 50 | empty |
| 2 | 216 | 0.52 | 0.77 | 26 | empty |
| 3 | 179 | 0.48 | 0.76 | 27 | empty |
Interfaces
1 interface between chains.
- A–B · 601 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 7Y79 · Crystal structure of Cry78Aa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A3S6Q0Y2
- Elsewhere: RCSB PDB 7Y79 · PDBe 7Y79 · UniProt A0A3S6Q0Y2
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