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Cryo-EM structure of the bacteriocin-receptor-immunity ternary complex from lactobacillus sakei

Analyse Cryo-EM structure of the bacteriocin-receptor-immunity ternary complex from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7XNO
Type
protein
Length
2,085 residues
Chains
12
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A310, A0A094YUG1, A0A094XZA1, Q48864
Ligands
MAN

Structure

electron microscopy · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, C, G—protein41—P0A310
Y, D, H—protein247—A0A094YUG1
Z, E, I—protein301—A0A094XZA1
B, F, J—protein106—Q48864

Ligands and binding sites

  • MAN · alpha-D-mannopyranose · sugar · 3 copies · chains Y, Z, D, E, H, I

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7XNO · Cryo-EM structure of the bacteriocin-receptor-immunity ternary complex from Lactobacillus… · the same entry in another collection · chain J against J, TM-score 1.00

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