Research workbench
Structural insight into the interactions between lloviu virus VP30 and nucleoprotein
Analyse Structural insight into the interactions between lloviu virus VP30 and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7XIV
- Type
- protein
- Length
- 259 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleocapsid PROTEIN,MINOR nucleoprotein VP30
- UniProt
- G8EFI6
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 2 distinct chains · 71% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleocapsid PROTEIN,MINOR nucleoprotein VP30 | protein | 134 | 68% helix, 1% strand | G8EFI6 |
| B | Nucleocapsid PROTEIN,MINOR nucleoprotein VP30 | protein | 125 | 74% helix, 1% strand | G8EFI6 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.49 | 0.75 | 40 | empty |
Interfaces
1 interface between chains.
- A–B · 2169 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 7XIV · Structural insight into the interactions between Lloviu virus VP30 and nucleoprotein · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G8EFI6
- Elsewhere: RCSB PDB 7XIV · PDBe 7XIV · UniProt G8EFI6
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