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Structural genomics, protein yjcs

Analyse Structural genomics, protein yjcs in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1Q8B
Type: protein
Length: 93 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein yjcs
UniProt: O31641
Pockets: 1 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein yjcs	protein	93	34% helix, 40% strand	O31641

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	153	0.58	0.82	23	empty

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

1Q8B · Structural Genomics, protein YJCS · the same entry in another collection · chain A against A, TM-score 1.00
O31641 · AlphaFold monomer V2.0 prediction for uncharacterized protein yjcs (O31641) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O31641
Elsewhere: RCSB PDB 1Q8B · PDBe 1Q8B · UniProt O31641

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