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Anabolic ornithine carbamoyltransferases (otcs) from psychrobacter sp. pamc 21119
Analyse Anabolic ornithine carbamoyltransferases (otcs) from psychrobacter sp. pamc… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7X99
- Type
- protein
- Length
- 588 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ornithine carbamoyltransferase
- Pockets
- 8 · best druggability 0.67
Structure
x-ray diffraction · 2 distinct chains · 46% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ornithine carbamoyltransferase | protein | 294 | 47% helix, 15% strand | — |
| B | Ornithine carbamoyltransferase | protein | 294 | 46% helix, 14% strand | — |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 270 | 0.67 | 0.83 | 41 | empty |
| 2 | 275 | 0.59 | 0.79 | 33 | empty |
| 3 | 211 | 0.52 | 0.77 | 44 | empty |
| 4 | 157 | 0.52 | 0.80 | 23 | empty |
| 5 | 71 | 0.38 | 0.77 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 688 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7X99 · Anabolic ornithine carbamoyltransferases (OTCs) from Psychrobacter sp. PAMC 21119 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7X99 · PDBe 7X99
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