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Structure of pdcov mpro in complex with an inhibitor
Analyse Structure of pdcov mpro in complex with an inhibitor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7WKU
- Type
- protein
- Length
- 1,816 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A166XB12
- Ligands
- 02J, PJE, 010
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 304 | — | A0A166XB12 |
| B | — | protein | 299 | — | A0A166XB12 |
| D | — | protein | 302 | — | A0A166XB12 |
| E | — | protein | 291 | — | A0A166XB12 |
| F | — | protein | 298 | — | A0A166XB12 |
| H, I, J, K, L, M | — | protein | 3 | — | — |
Ligands and binding sites
- 02J · 5-methyl-1,2-oxazole-3-carboxylic acid · ligand · 6 copies · chains E, H, F, I, A, J, B, K, C, L, D, M
- PJE · (E,4S)-4-azanyl-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoic acid · ligand · 6 copies · chains E, H, F, I, A, J, B, K, C, L, D, M
- 010 · phenylmethanol · ligand · 6 copies · chains E, F, A, B, D, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WKU · Structure of PDCoV Mpro in complex with an inhibitor · the same entry in another collection · chain I against I, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A166XB12
- Elsewhere: RCSB PDB 7WKU · PDBe 7WKU · UniProt A0A166XB12
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