Research workbench
NMR solution structure of a cgmp fill-in vacancy G-quadruplex formed in the oxidized blm gene promoter
Analyse NMR solution structure of a cgmp fill-in vacancy G-quadruplex formed in the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7WGW
- Type
- DNA
- Length
- 20 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (20-mer)
- Ligands
- PCG
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | DNA (20-mer) | dna | 20 | — | — |
Ligands and binding sites
- PCG · Cyclic guanosine monophosphate · ligand · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 7WGW · NMR Solution Structure of a cGMP Fill-in Vacancy G-quadruplex Formed in the Oxidized BLM… · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7WGW · PDBe 7WGW
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