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Tks-L190G mutant from cannabis sativa in complex with lauroyl-CoA

Analyse Tks-L190G mutant from cannabis sativa in complex with lauroyl-CoA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7W6G
Type
protein
Length
1,529 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
B1Q2B6
Ligands
8I9

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, D—protein383—B1Q2B6
B—protein381—B1Q2B6
C—protein382—B1Q2B6

Ligands and binding sites

  • 8I9 · ~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] tridecanethioate · ligand · 2 copies · chains C, B, D
  • GOL · Glycerol · additive · 8 copies · chains A, C, D
  • PEG · Di(hydroxyethyl)ether · additive · 5 copies · chains A, C, B
  • PG4 · Tetraethylene glycol · additive · chains C
  • 1PE · Pentaethylene glycol · additive · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7W6G · TKS-L190G mutant from Cannabis sativa in complex with lauroyl-CoA · the same entry in another collection · chain A against A, TM-score 1.00
  • B1Q2B6 · AlphaFold monomer V2.0 prediction for 3,5,7-trioxododecanoyl-CoA synthase (B1Q2B6) · a predicted model of the same protein · chain C against A, TM-score 1.00

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