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The apo structure of trichobrasilenol synthase TATC6 with the space group of orthorhombic

Analyse The apo structure of trichobrasilenol synthase TATC6 with the space group of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7W5G
Type: protein
Length: 355 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Terpene cyclase 6
EC: 4.2.3.-, 4.2.3.104, 4.2.3.137, 4.2.3.157, 4.2.3.182, 4.2.3.57
UniProt: A0A5S9I252
Ligands: SO4
Pockets: 2 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Terpene cyclase 6 (EC 4.2.3.-, 4.2.3.104, 4.2.3.137, 4.2.3.157, 4.2.3.182, 4.2.3.57)	protein	355	66% helix, 3% strand	A0A5S9I252

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	807	0.81	0.84	65	SO4, GOL
2	101	0.37	0.75	18	empty

Compared structures

7W5G · The apo structure of trichobrasilenol synthase TaTC6 with the space group of orthorhombic · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A5S9I252
Elsewhere: RCSB PDB 7W5G · PDBe 7W5G · UniProt A0A5S9I252

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