Research workbench
Crystal structure of the chromodomain of arabidopsis LHP1 in complex with methylated histone H3K9 peptide
Analyse Crystal structure of the chromodomain of arabidopsis LHP1 in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7VYW
- Type
- protein
- Length
- 53 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q946J8
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 47 | — | Q946J8 |
| B | — | protein | 6 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VYW · Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated… · the same entry in another collection · chain A against A, TM-score 1.00
- Q946J8 · AlphaFold monomer V2.0 prediction for chromo domain-containing protein LHP1 (Q946J8) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q946J8
- Elsewhere: RCSB PDB 7VYW · PDBe 7VYW · UniProt Q946J8
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