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High-resolution neutron and X-ray joint refined structure of high- potential iron-sulfur protein in the oxidized state

Analyse High-resolution neutron and X-ray joint refined structure of high- potential… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7VOS
Type
protein
Length
83 residues
Chains
1
Method
x-ray diffraction; neutron diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
High-potential iron-sulfur protein
UniProt
P80176
Ligands
SF4, SO4, NH4, D3O

Structure

x-ray diffraction; neutron diffraction · 1 distinct chain · 22% helix, 23% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHigh-potential iron-sulfur proteinprotein8322% helix, 23% strandP80176

Ligands and binding sites

  • SF4 · Iron/sulfur cluster · ligand · chains A
  • SO4 · Sulfate ion · ion · 5 copies · chains A
  • NH4 · Ammonium ion · ion · 4 copies · chains A
  • D3O · trideuteriooxidanium · ion
  • GOL · Glycerol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7VOS · High-resolution neutron and X-ray joint refined structure of high-potential iron-sulfur… · the same entry in another collection · chain A against A, TM-score 1.00
  • P80176 · AlphaFold monomer V2.0 prediction for high-potential iron-sulfur protein (P80176) · a predicted model of the same protein · chain A against A, TM-score 0.97

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