Research workbench
NMR structure of type ivb pilin (pils) from salmonella typhi
Analyse NMR structure of type ivb pilin (pils) from salmonella typhi in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1Q5F
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pils
- UniProt
- Q9ZIU9
- Pockets
- 4 · best druggability 0.59
Structure
solution nmr · 1 distinct chain · 26% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pils | protein | 156 | 26% helix, 20% strand | Q9ZIU9 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 196 | 0.59 | 0.81 | 37 | empty |
| 2 | 87 | 0.43 | 0.79 | 23 | empty |
| 3 | 63 | 0.37 | 0.79 | 20 | empty |
| 4 | 71 | 0.30 | 0.73 | 18 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1Q5F · NMR Structure of Type IVb pilin (PilS) from Salmonella typhi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZIU9
- Elsewhere: RCSB PDB 1Q5F · PDBe 1Q5F · UniProt Q9ZIU9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.