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Solution structure of hypothetical arabidopsis thaliana protein AT3G17210. center for eukaryotic structural genomics target 13081

Analyse Solution structure of hypothetical arabidopsis thaliana protein AT3G17210.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1Q53
Type: protein
Length: 224 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Expressed protein: AT3G17210
UniProt: Q9LUV2
Pockets: 3 · best druggability 0.67

Structure

solution nmr · 1 distinct chain · 32% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Expressed protein: AT3G17210	protein	112	32% helix, 26% strand	Q9LUV2

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	242	0.67	0.83	36	empty
2	223	0.60	0.80	38	empty
3	50	0.25	0.73	15	empty

Interfaces

1 interface between chains.

A–B · 1447 Å² buried · 13 hydrogen bonds · protein-protein

Compared structures

1Q53 · Solution structure of hypothetical arabidopsis thaliana protein AT3G17210. center for… · the same entry in another collection · chain A against A, TM-score 1.00
Q9LUV2 · AlphaFold monomer V2.0 prediction for stress-response A/B barrel domain-containing… · a predicted model of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9LUV2
Elsewhere: RCSB PDB 1Q53 · PDBe 1Q53 · UniProt Q9LUV2

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