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Crystal structure of allo-ILEA2-insulin, an inactive chiral analogue: implications for the mechanism of receptor

Analyse Crystal structure of allo-ILEA2-insulin, an inactive chiral analogue… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1Q4V
Type
protein
Length
102 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Insulin
Ligands
IPH, ZN

Structure

x-ray diffraction · 2 distinct chains · 41% helix, 8% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, CInsulinprotein2148% helix, 5% strand—
B, DInsulinprotein3037% helix, 10% strand—

Ligands and binding sites

  • IPH · Phenol · ligand · chains C, D
  • ZN · Zinc ion · metal · 2 copies · chains B, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

5 interfaces between chains.

  • A–B · 845 Ų buried · 11 hydrogen bonds · protein-protein
  • B–D · 678 Ų buried · 7 hydrogen bonds · protein-protein
  • C–D · 638 Ų buried · 3 hydrogen bonds · protein-protein
  • A–D · 54 Ų buried · 1 hydrogen bond · protein-protein
  • B–C · 26 Ų buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide, 2 modified (disulfide, nonstandard).

Compared structures

  • 1Q4V · Crystal structure of allo-ILEA2-insulin, an inactive chiral analogue: implications for… · the same entry in another collection · chain A against A, TM-score 1.00

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