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Structure of the aaa+ ATPase domain of the transcriptional regulator gtrr in burkholderia cenocepacia

Analyse Structure of the aaa+ ATPase domain of the transcriptional regulator gtrr in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7VBS
Type: protein
Length: 238 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sigma-54 dependent trancsriptional regulator
UniProt: A0A1V2W4X9
Ligands: PO4
Pockets: 1 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sigma-54 dependent trancsriptional regulator	protein	238	53% helix, 13% strand	A0A1V2W4X9

Ligands and binding sites

PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	127	0.43	0.76	30	PO4

Compared structures

7VBS · Structure of the AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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Every structure of UniProt A0A1V2W4X9
Elsewhere: RCSB PDB 7VBS · PDBe 7VBS · UniProt A0A1V2W4X9

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