Research workbench
DENV2_NGC_FAB_C10 4DEGREES (3FAB:3E)
Analyse DENV2_NGC_FAB_C10 4DEGREES (3FAB:3E) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7V3I
- Type
- protein
- Length
- 2,173 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope protein E; Small envelope protein M; FAB_C10_LIGHT_CHAIN; FAB_C10_HEAVY_CHAIN
- UniProt
- P14340
Structure
electron microscopy · 4 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A, C | Envelope protein E | protein | 495 | 0% helix, 0% strand | P14340 |
| E, D, F | Small envelope protein M | protein | 72 | 0% helix, 0% strand | P14340 |
| I, G | FAB_C10_LIGHT_CHAIN | protein | 127 | 0% helix, 0% strand | — |
| M, H | FAB_C10_HEAVY_CHAIN | protein | 109 | 0% helix, 0% strand | — |
Interfaces
17 interfaces between chains.
- A–C · 346 Ų buried · 0 hydrogen bonds · protein-protein
- C–F · 262 Ų buried · 0 hydrogen bonds · protein-protein
- B–E · 260 Ų buried · 0 hydrogen bonds · protein-protein
- A–D · 241 Ų buried · 0 hydrogen bonds · protein-protein
- B–A · 165 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 7V3I · DENV2_NGC_Fab_C10 4degrees (3Fab:3E) · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14340
- Elsewhere: RCSB PDB 7V3I · PDBe 7V3I · UniProt P14340
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