Research workbench
Woodchuck hepatitis small surface protein without cytosolic and antigenic loops
Analyse Woodchuck hepatitis small surface protein without cytosolic and antigenic loops in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7TUL
- Type
- protein
- Length
- 278 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Large envelope protein
- UniProt
- P17400
- Pockets
- 2 · best druggability 0.56
Structure
electron microscopy · 2 distinct chains · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | Large envelope protein | protein | 140 | 95% helix, 0% strand | P17400 |
| A | Large envelope protein | protein | 138 | 88% helix, 0% strand | P17400 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 341 | 0.56 | 0.75 | 27 | empty |
| 2 | 240 | 0.54 | 0.76 | 25 | empty |
Interfaces
1 interface between chains.
- B–A · 1359 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 7TUL · Woodchuck hepatitis small surface protein without cytosolic and antigenic loops · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17400
- Elsewhere: RCSB PDB 7TUL · PDBe 7TUL · UniProt P17400
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