Research workbench
Crystal structures of two ubc (E2) enzymes of the ubiquitin- conjugating system in caenorhabditis elegans
Analyse Crystal structures of two ubc (E2) enzymes of the ubiquitin- conjugating system… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PZV
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable ubiquitin-conjugating enzyme E2-19 kda
- EC
- 6.3.2.19
- UniProt
- P34477
- Pockets
- 1 · best druggability 0.30
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable ubiquitin-conjugating enzyme E2-19 kda (EC 6.3.2.19) | protein | 152 | 36% helix, 17% strand | P34477 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.30 | 0.75 | 21 | empty |
Compared structures
- 1PZV · Crystal structures of two UBC (E2) enzymes of the ubiquitin-conjugating system in… · the same entry in another collection · chain A against A, TM-score 1.00
- P34477 · AlphaFold monomer V2.0 prediction for probable ubiquitin-conjugating enzyme E2 7 (P34477) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34477
- Elsewhere: RCSB PDB 1PZV · PDBe 1PZV · UniProt P34477
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