Research workbench
Crystal structure of SHHTL7 from striga hermonthica in complex with strigolactone antagonist RG6
Analyse Crystal structure of SHHTL7 from striga hermonthica in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7SNU
- Type
- protein
- Length
- 270 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hyposensitive to light 7
- UniProt
- A0A0M3PNA2
- Ligands
- HFJ, MG
- Pockets
- 1 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hyposensitive to light 7 | protein | 270 | 47% helix, 17% strand | A0A0M3PNA2 |
Ligands and binding sites
- HFJ · 2-{(2S)-1-[(4-ethoxyphenyl)methyl]-4-[(2E)-3-(4-methoxyphenyl)prop-2-en-1-yl]piperazin-2-yl}ethan-1-ol · ligand · chains A
- MG · Magnesium ion · metal · chains A
- ACT · Acetate ion · additive · 5 copies · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- IMD · Imidazole · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 331 | 0.79 | 0.89 | 35 | GOL, HFJ |
Compared structures
- 7SNU · Crystal structure of ShHTL7 from Striga hermonthica in complex with strigolactone… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0M3PNA2
- Elsewhere: RCSB PDB 7SNU · PDBe 7SNU · UniProt A0A0M3PNA2
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