Research workbench
Solution structure of the zinc finger domain of murine METAP1, complexed with zng N-terminal peptide
Analyse Solution structure of the zinc finger domain of murine METAP1, complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7SEK
- Type
- protein
- Length
- 80 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cobw domain-containing protein 1,METHIONINE aminopeptidase 1 fusion
- EC
- 3.4.11.18
- UniProt
- Q8VEH6, Q8BP48
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 26% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cobw domain-containing protein 1,METHIONINE aminopeptidase 1 fusion (EC 3.4.11.18) | protein | 80 | 26% helix, 10% strand | Q8VEH6, Q8BP48 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SEK · Solution structure of the zinc finger domain of murine MetAP1, complexed with ZNG… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8BP48 · AlphaFold monomer V2.0 prediction for methionine aminopeptidase 1 (Q8BP48) · a predicted model of the same protein · chain A against A, TM-score 0.59
- Q8VEH6 · AlphaFold monomer V2.0 prediction for cobw domain-containing protein 1 (Q8VEH6) · a predicted model of the same protein · chain A against A, TM-score 0.37
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VEH6
- Every structure of UniProt Q8BP48
- Elsewhere: RCSB PDB 7SEK · PDBe 7SEK · UniProt Q8VEH6 · UniProt Q8BP48
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