Research workbench
Tandem diubiquitin-like domain from chicken 2'-5'-oligoadenylate synthetase-like protein
Analyse Tandem diubiquitin-like domain from chicken 2'-5'-oligoadenylate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7SBI
- Type
- protein
- Length
- 310 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 2'-5' oligoadenylate synthase
- UniProt
- O13255
- Pockets
- 1 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 23% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2'-5' oligoadenylate synthase | protein | 154 | 23% helix, 34% strand | O13255 |
| B | 2'-5' oligoadenylate synthase | protein | 156 | 23% helix, 33% strand | O13255 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1001 | 0.71 | 0.75 | 81 | empty |
Interfaces
1 interface between chains.
- A–B · 652 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 7SBI · Tandem diubiquitin-like domain from chicken 2'-5'-oligoadenylate synthetase-like protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O13255
- Elsewhere: RCSB PDB 7SBI · PDBe 7SBI · UniProt O13255
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