Research workbench
Hairpin near 3'-splice site of influenza a segment 7 bound to 5-nt oligonucleotide
Analyse Hairpin near 3'-splice site of influenza a segment 7 bound to 5-nt… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7RQ5
- Type
- RNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'- R(*AP*UP*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*AP*UP*A)-3'); RNA…
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'- R(*AP*UP*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*AP*UP*A)-3') | rna | 19 | — | — |
| B | RNA (5'-D(*(MU5)P*(MLC)P*(MRC))-R(P*(LG)P*(MU3))-3') | rna | 5 | — | — |
Interfaces
1 interface between chains.
- A–B · 368 Ų buried · 24 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 5 modified (nucleotide modification).
Compared structures
- 7RQ5 · Hairpin near 3'-Splice Site of Influenza A Segment 7 Bound to 5-nt Oligonucleotide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7RQ5 · PDBe 7RQ5
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